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  5. SymbC1.scaffold6432.1

SymbC1.scaffold6432.1 (6432.1)


Aliases : 6432.1

Description : Pyridoxal-phosphate dependent enzyme; Threonine dehydratase, ACT-like domain [Interproscan].


Gene families : OG_01_0000211 (OrthoFinder) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6432.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cz04g11090.t1 No alias Pyridoxal-phosphate dependent enzyme; Threonine... 0.02 OrthoFinder
OT_12G01470.1 No alias Pyridoxal-phosphate dependent enzyme; Threonine... 0.02 OrthoFinder
XM_002502119.1 MICPUN_81963, 81963 Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.02 OrthoFinder
XM_002504927.1 MICPUN_86447, 86447 Pyridoxal-phosphate dependent enzyme [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39107.1_2744 PRW39107 Threonine deaminase isoform A 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001721 TD_ACT-like 337 417
IPR001721 TD_ACT-like 432 494
IPR001926 PLP-dep 27 320
No external refs found!