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  5. SymbC1.scaffold6425.3

SymbC1.scaffold6425.3 (6425.3)


Aliases : 6425.3

Description : Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan].


Gene families : OG_01_0000480 (OrthoFinder) Phylogenetic Tree(s): OG0000480_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold6425.3
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold7515.4 7515.4 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.06 OrthoFinder
Transcript_contig_78102 78102 Mei2/Mei2-like, C-terminal RNA recognition motif [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000935.1_cds_GFH16034.1_10511 HaLaN_12379, GFH16034 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 242 338
No external refs found!