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  5. SymbC1.scaffold6370.5

SymbC1.scaffold6370.5 (6370.5)


Aliases : 6370.5

Description : 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB [Interproscan].


Gene families : OG_01_0000582 (OrthoFinder) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6370.5
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cz03g34120.t1 No alias GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone... 0.01 OrthoFinder
OT_06G00870.1 No alias GTP cyclohydrolase II [Interproscan]. 0.02 OrthoFinder
OT_08G01610.1 No alias GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEA Interproscan
BP GO:0009231 riboflavin biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000422 DHBP_synthase_RibB 7 198
No external refs found!