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  5. SymbC1.scaffold6359.3

SymbC1.scaffold6359.3 (6359.3)


Aliases : 6359.3

Description : Rieske [2Fe-2S] iron-sulphur domain; Pheophorbide a oxygenase [Interproscan].


Gene families : OG_01_0000145 (OrthoFinder) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6359.3
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000681.17 tig00000681_g3064.t1 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000889.1 tig00000889_g5288.t1 Protein TIC 55, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020614.93 tig00020614_g12207.t1 Protein TIC 55, chloroplastic OS=Pisum sativum 0.01 OrthoFinder
Cre03.g173450 30787929 Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana 0.04 OrthoFinder
lcl|BLLF01001611.1_cds_GFH20299.1_14776 HaLaN_17394, GFH20299 (2Fe-2S)-binding protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEA Interproscan
MF GO:0051537 2 iron, 2 sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013626 PaO 206 245
IPR017941 Rieske_2Fe-2S 7 73
No external refs found!