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  5. SymbC1.scaffold6350.2

SymbC1.scaffold6350.2 (6350.2)


Aliases : 6350.2

Description : Hypothetical protein


Gene families : OG_01_0000368 (OrthoFinder) Phylogenetic Tree(s): OG0000368_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6350.2
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold11773.1 11773.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold15590.1 15590.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold15715.1 15715.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold2598.3 2598.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold4040.3 4040.3 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold4059.4 4059.4 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold7875.1 7875.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold9799.1 9799.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold9799.2 9799.2 Zinc finger, CCHC-type [Interproscan]. 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004664 prephenate dehydratase activity IEP Enrichment
BP GO:0006558 L-phenylalanine metabolic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009094 L-phenylalanine biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Enrichment
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!