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  5. SymbC1.scaffold6313.1

SymbC1.scaffold6313.1 (6313.1)


Aliases : 6313.1

Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0003192 (OrthoFinder) Phylogenetic Tree(s): OG0003192_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6313.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1419.1 1419.1 Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
SymbC1.scaffold2007.8 2007.8 Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
SymbC1.scaffold4461.2 4461.2 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold5729.4 5729.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold9478.1 9478.1 Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004150 dihydroneopterin aldolase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1175 1412
No external refs found!