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  5. SymbC1.scaffold6244.1

SymbC1.scaffold6244.1 (6244.1)


Aliases : 6244.1

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0003194 (OrthoFinder) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold6244.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1520.5 1520.5 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold3462.2 3462.2 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000255 allantoin metabolic process IEP Enrichment
BP GO:0000256 allantoin catabolic process IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0050385 ureidoglycolate lyase activity IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 291 530
No external refs found!