SymbC1.scaffold6132.5 (6132.5)

Aliases : 6132.5

Description : Cold-shock protein, DNA-binding [Interproscan].

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold6132.5
Cluster	HCCA: Cluster_109

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00000169.17	tig00000169_g11886.t1	External stimuli response.temperature.Csd...	0.01	OrthoFinder
Cre06.g249800	30780167	Lipid metabolism.sphingolipid...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	Enrichment
BP	GO:0007017	microtubule-based process	IEP	Enrichment
BP	GO:0007018	microtubule-based movement	IEP	Enrichment
MF	GO:0008017	microtubule binding	IEP	Enrichment
MF	GO:0008092	cytoskeletal protein binding	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
MF	GO:0015631	tubulin binding	IEP	Enrichment
MF	GO:0016829	lyase activity	IEP	Enrichment
CC	GO:0035145	exon-exon junction complex	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	25	83

External Links

No external refs found!