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  5. SymbC1.scaffold5907.1

SymbC1.scaffold5907.1 (5907.1)


Aliases : 5907.1

Description : Regulator of chromosome condensation (RCC1) repeat; Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA oxidase/dehydrogenase, central domain [Interproscan].


Gene families : OG_01_0001166 (OrthoFinder) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5907.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold13774.1 13774.1 Regulator of chromosome condensation (RCC1) repeat... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 19 97
IPR009075 AcylCo_DH/oxidase_C 123 182
IPR009075 AcylCo_DH/oxidase_C 534 625
No external refs found!