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  5. Cpa|evm.model.tig00020614.59

Cpa|evm.model.tig00020614.59 (tig00020614_g12171.t1)


Aliases : tig00020614_g12171.t1

Description : Myosin-5 OS=Arabidopsis thaliana


Gene families : OG_01_0000062 (OrthoFinder) Phylogenetic Tree(s): OG0000062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020614.59
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre03.g197800 30786620 Myosin-11 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz03g31140.t1 No alias Myosin head, motor domain; Myosin, N-terminal, SH3-like;... 0.02 OrthoFinder
Dusal.0024s00002.1 33202221 Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
EOD09565 No alias RUN domain; Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
EOD11728 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
EOD14709 No alias Myosin head, motor domain; IQ motif, EF-hand binding... 0.03 OrthoFinder
EOD42145 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
PTI_07G00500.1 No alias Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
PTI_12G01740.1 No alias Ankyrin repeats (many copies); Myosin head, motor domain... 0.02 OrthoFinder
PTI_12G02850.1 No alias CBS domain; Myosin head, motor domain; PB1 domain [Interproscan]. 0.02 OrthoFinder
Sro125_g060370.1 Contig2833.g22748 Myosin type-2 heavy chain 0.01 OrthoFinder
Sro767_g199470.1 Contig2377.g19535 Unconventional myosin 0.02 OrthoFinder
TP01G04680.1 No alias Myosin head, motor domain [Interproscan]. 0.01 OrthoFinder
TP02G09630.1 No alias Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0060.1 32895733 Myosin head, motor domain; IQ motif, EF-hand binding... 0.02 OrthoFinder
XM_002500195.1 MICPUN_106745, 106745 Dilute domain; IQ motif, EF-hand binding site; Myosin... 0.01 OrthoFinder
XM_003057617.1 MicpuC2_16046, 16046 Myosin head, motor domain [Interproscan]. 0.02 OrthoFinder
XM_003061906.1 MicpuC2_28890, 28890 Dilute domain; Myosin head, motor domain; Myosin,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEA Interproscan
MF GO:0005096 GTPase activator activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0042157 lipoprotein metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR024584 Tuberin_N 1991 2106
IPR001609 Myosin_head_motor_dom 1 419
IPR000331 Rap/Ran_GAP_dom 2927 3131
No external refs found!