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  5. SymbC1.scaffold5856.2

SymbC1.scaffold5856.2 (5856.2)


Aliases : 5856.2

Description : Ion transport domain [Interproscan].


Gene families : OG_01_0003201 (OrthoFinder) Phylogenetic Tree(s): OG0003201_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5856.2
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1496.1 1496.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold1605.10 1605.10 EF-hand domain; Ion transport domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold245.6 245.6 EF-hand domain; Ion transport domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2793.1 2793.1 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold5300.2 5300.2 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold9634.1 9634.1 Ion transport domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 170 299
No external refs found!