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Aliases : 5845.1
Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0007251 (OrthoFinder) Phylogenetic Tree(s): OG0007251_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold5845.1 | |
| Cluster | HCCA: Cluster_103 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold11211.1 | 11211.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold1743.3 | 1743.3 | Hypothetical protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold233.5 | 233.5 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold7177.1 | 7177.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold979.2 | 979.2 | Hypothetical protein | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Enrichment |
| MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004803 | transposase activity | IEP | Enrichment |
| MF | GO:0005539 | glycosaminoglycan binding | IEP | Enrichment |
| BP | GO:0006313 | transposition, DNA-mediated | IEP | Enrichment |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0032196 | transposition | IEP | Enrichment |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
| MF | GO:0042834 | peptidoglycan binding | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 972 | 1106 |
| No external refs found! |