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  5. SymbC1.scaffold5625.3

SymbC1.scaffold5625.3 (5625.3)


Aliases : 5625.3

Description : Hypothetical protein


Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5625.3
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000555.7 tig00000555_g2134.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00001428.9 tig00001428_g8728.t1 No description available 0.04 OrthoFinder
Cz04g31190.t1 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.05 OrthoFinder
Vocar.0004s0317.1 32889553 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Vocar.0014s0180.1 32888647 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Vocar.0032s0151.1 32893834 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_002504081.1 MICPUN_102087, 102087 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!