SymbC1.scaffold5625.2 (5625.2)

Aliases : 5625.2

Description : Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan].

Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold5625.2
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000551.10	tig00000551_g2032.t1	No description available	0.01	OrthoFinder
Cre02.g146650	30785127	No description available	0.01	OrthoFinder
Cre04.g212550	30791327	No description available	0.01	OrthoFinder
Vocar.0007s0203.1	32887988	Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01003987.1_cds_GFH28670.1_23147	HaLaN_27204, GFH28670	Hypothetical protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
BP	GO:0006464	cellular protein modification process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent deubiquitinase	IEP	Enrichment
MF	GO:0005509	calcium ion binding	IEP	Enrichment
MF	GO:0008242	omega peptidase activity	IEP	Enrichment
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Enrichment
MF	GO:0101005	deubiquitinase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004344	TTL/TTLL_fam	24	205

External Links

No external refs found!