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  5. SymbC1.scaffold5548.5

SymbC1.scaffold5548.5 (5548.5)


Aliases : 5548.5

Description : Protein of unknown function DUF1800 [Interproscan].


Gene families : OG_01_0000396 (OrthoFinder) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5548.5
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
EOD24045 No alias Protein of unknown function DUF1501; Protein of unknown... 0.01 OrthoFinder
TP02G09030.1 No alias Hypothetical protein 0.02 OrthoFinder
TP06G02060.1 No alias Protein of unknown function DUF1501; Protein of unknown... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008272 sulfate transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015116 sulfate transmembrane transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
BP GO:0072348 sulfur compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR014917 DUF1800 1237 1494
IPR014917 DUF1800 612 849
No external refs found!