SymbC1.scaffold5540.1 (5540.1)

Aliases : 5540.1

Description : Hypothetical protein

Gene families : OG_01_0000978 (OrthoFinder) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold5540.1
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold13918.1	13918.1	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold1395.7	1395.7	Hypothetical protein	0.05	OrthoFinder
SymbC1.scaffold1543.1	1543.1	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold3093.3	3093.3	Hypothetical protein	0.03	OrthoFinder
SymbC1.scaffold4158.6	4158.6	Hypothetical protein	0.04	OrthoFinder
SymbC1.scaffold675.8	675.8	Hypothetical protein	0.04	OrthoFinder
SymbC1.scaffold8480.2	8480.2	Hypothetical protein	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Enrichment
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006298	mismatch repair	IEP	Enrichment
MF	GO:0017076	purine nucleotide binding	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0030983	mismatched DNA binding	IEP	Enrichment
MF	GO:0032553	ribonucleotide binding	IEP	Enrichment
MF	GO:0032555	purine ribonucleotide binding	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0097367	carbohydrate derivative binding	IEP	Enrichment

No InterPro domains available for this sequence

External Links

No external refs found!