SymbC1.scaffold5512.1 (5512.1)

Aliases : 5512.1

Description : Glycoside hydrolase family 2, catalytic domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain/ domain 5; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich [Interproscan].

Gene families : OG_01_0001479 (OrthoFinder) Phylogenetic Tree(s): OG0001479_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold5512.1
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro441_g143760.1	Contig470.g6390	Beta-galactosidase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
MF	GO:0004565	beta-galactosidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009341	beta-galactosidase complex	IEA	Interproscan
MF	GO:0015925	galactosidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Enrichment
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Enrichment
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Enrichment
BP	GO:0008380	RNA splicing	IEP	Enrichment
CC	GO:0018995	host cellular component	IEP	Enrichment
CC	GO:0033643	host cell part	IEP	Enrichment
CC	GO:0033646	host intracellular part	IEP	Enrichment
CC	GO:0033647	host intracellular organelle	IEP	Enrichment
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0035145	exon-exon junction complex	IEP	Enrichment
CC	GO:0042025	host cell nucleus	IEP	Enrichment
CC	GO:0043227	membrane-bounded organelle	IEP	Enrichment
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006104	Glyco_hydro_2_N	220	355
IPR006102	Glyco_hydro_2_Ig-like	417	523
IPR004199	B-gal_small/dom_5	1014	1297
IPR006103	Glyco_hydro_2_cat	525	843

External Links

No external refs found!

SymbC1.scaffold5512.1 (5512.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation