SymbC1.scaffold551.2 (551.2)

Aliases : 551.2

Description : WW domain; Cold-shock protein, DNA-binding; Ubiquitin-conjugating enzyme E2-binding protein [Interproscan].

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold551.2
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro79_g042740.1	Contig1826.g16081	Sensitive element-binding protein 1	0.01	OrthoFinder
XM_003061863.1	MicpuC2_70864, 70864	Cold-shock DNA binding protein (CSD)	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004784	superoxide dismutase activity	IEP	Enrichment
CC	GO:0016021	integral component of membrane	IEP	Enrichment
MF	GO:0016151	nickel cation binding	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Enrichment
CC	GO:0031224	intrinsic component of membrane	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	77	128
IPR002059	CSP_DNA-bd	4	60
IPR019193	UBQ-conj_enz_E2-bd_prot	1365	1469
IPR001202	WW_dom	282	307
IPR001202	WW_dom	221	251

External Links

No external refs found!