SymbC1.scaffold551.2 (551.2)

Aliases : 551.2

Description : WW domain; Cold-shock protein, DNA-binding; Ubiquitin-conjugating enzyme E2-binding protein [Interproscan].

Gene families : OG_01_0000183 (OrthoFinder) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold551.2
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Sro79_g042740.1 Contig1826.g16081 Sensitive element-binding protein 1 0.01 OrthoFinder
XM_003061863.1 MicpuC2_70864, 70864 Cold-shock DNA binding protein (CSD) 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 77 128
IPR002059 CSP_DNA-bd 4 60
IPR019193 UBQ-conj_enz_E2-bd_prot 1365 1469
IPR001202 WW_dom 282 307
IPR001202 WW_dom 221 251
No external refs found!