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  5. SymbC1.scaffold5480.2

SymbC1.scaffold5480.2 (5480.2)


Aliases : 5480.2

Description : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain [Interproscan].


Gene families : OG_01_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold5480.2
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000402.47 tig00000402_g224.t1 Protein modification.protein folding and quality... 0.02 OrthoFinder
Cpa|evm.model.tig00020693.8 tig00020693_g13013.t1 RNA processing.RNA splicing.spliceosome-associated... 0.01 OrthoFinder
Cre01.g002300 30788660 Protein modification.protein folding and quality... 0.05 OrthoFinder
Cre12.g495951 30792445 Protein modification.protein folding and quality... 0.05 OrthoFinder
Cre12.g533800 30792269, CYN22 Protein modification.protein folding and quality... 0.01 OrthoFinder
Cre12.g544114 30792216 Protein modification.protein folding and quality... 0.04 OrthoFinder
Cre13.g588100 30783969 Protein modification.protein folding and quality... 0.01 OrthoFinder
Dusal.1065s00003.1 33198621 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder
OT_09G01350.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
OT_17G01840.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.03 OrthoFinder
PTI_06G03450.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
Sro146_g067660.1 Contig2363.g19456 Cis-trans isomerase 0.02 OrthoFinder
Sro245_g097450.1 Contig3087.g24616 Cis-trans isomerase 0.02 OrthoFinder
TP02G08910.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
TP17G00010.1 No alias Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder
Vocar.0031s0055.1 32890185 Cyclophilin-type peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder
XM_002502735.1 MICPUN_96416, 96416 Radial spoke protein 12, cyclophilin-like protein (RSP12) 0.01 OrthoFinder
XM_003058546.1 MicpuC2_58285, 58285 Cyclophilin-type peptidyl-prolyl cis-trans isomerase 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56328.1_10312 PRW56328 Cyclophilin 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45741.1_1495 PRW45741 Peptidyl-prolyl cis-trans isomerase CYP19-4 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 22 173
No external refs found!