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  5. SymbC1.scaffold5445.4

SymbC1.scaffold5445.4 (5445.4)


Aliases : 5445.4

Description : Serine hydroxymethyltransferase-like domain [Interproscan].


Gene families : OG_01_0000330 (OrthoFinder) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold5445.4
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
OT_03G00940.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
PTI_01G07740.1 No alias Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1378.1 32885069 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.02 OrthoFinder
Vocar.0041s0018.1 32888726 Serine hydroxymethyltransferase-like domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 1 148
No external refs found!