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  5. Cpa|evm.model.tig00020610.86

Cpa|evm.model.tig00020610.86 (tig00020610_g12033.t1)


Aliases : tig00020610_g12033.t1

Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin II complex.CAP-H2 component


Gene families : OG_01_0004491 (OrthoFinder) Phylogenetic Tree(s): OG0004491_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020610.86
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cre09.g408900 30780983 Cell cycle.mitosis and meiosis.chromatin... 0.04 OrthoFinder
EOD07979 No alias Condensin II complex subunit H2, N-terminal [Interproscan]. 0.03 OrthoFinder
PTI_28G00840.1 No alias Condensin-2 complex subunit H2, C-terminal; Condensin II... 0.03 OrthoFinder
TP07G04800.1 No alias Condensin-2 complex subunit H2, C-terminal [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0066.1 32896977 Condensin-2 complex subunit H2, C-terminal; Condensin II... 0.03 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494964.1_3494 KAA8494964 Condensin II complex subunit H2, N-terminal; Condensin-2... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR009378 H2_N 14 120
IPR031737 CNDH2_C 384 452
No external refs found!