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  5. SymbC1.scaffold5362.2

SymbC1.scaffold5362.2 (5362.2)


Aliases : 5362.2

Description : Thrombospondin type-1 (TSP1) repeat [Interproscan].


Gene families : OG_01_0002877 (OrthoFinder) Phylogenetic Tree(s): OG0002877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5362.2
Cluster HCCA: Cluster_15


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000884 TSP1_rpt 1507 1555
IPR000884 TSP1_rpt 1097 1142
IPR000884 TSP1_rpt 499 545
IPR000884 TSP1_rpt 389 438
IPR000884 TSP1_rpt 672 722
IPR000884 TSP1_rpt 1440 1484
IPR000884 TSP1_rpt 1265 1314
IPR000884 TSP1_rpt 612 662
IPR000884 TSP1_rpt 336 378
IPR000884 TSP1_rpt 446 489
IPR000884 TSP1_rpt 797 846
IPR000884 TSP1_rpt 1159 1205
IPR000884 TSP1_rpt 1381 1427
IPR000884 TSP1_rpt 1624 1645
IPR000884 TSP1_rpt 731 775
IPR000884 TSP1_rpt 1321 1371
IPR000884 TSP1_rpt 1209 1257
IPR000884 TSP1_rpt 1039 1088
IPR000884 TSP1_rpt 555 600
No external refs found!