SymbC1.scaffold5336.2 (5336.2)


Aliases : 5336.2

Description : Hypothetical protein


Gene families : OG_01_0000978 (OrthoFinder) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5336.2
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold13918.1 13918.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold1543.1 1543.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold4158.6 4158.6 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold675.8 675.8 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold8480.2 8480.2 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006026 aminoglycan catabolic process IEP Enrichment
BP GO:0006027 glycosaminoglycan catabolic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
BP GO:0009253 peptidoglycan catabolic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
MF GO:0061783 peptidoglycan muralytic activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!