1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold5277.3

SymbC1.scaffold5277.3 (5277.3)


Aliases : 5277.3

Description : DNA mismatch repair protein MutS-like, N-terminal [Interproscan].


Gene families : OG_01_0000301 (OrthoFinder) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5277.3

Target Alias Description ECC score Gene Family Method Actions
Cre05.g235750 30783291, MSH6 DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre09.g397845 30781329 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cz04g14260.t1 No alias DNA mismatch repair protein MutS, connector domain; DNA... 0.01 OrthoFinder
Dusal.0149s00005.1 33186635 DNA mismatch repair protein MutS, connector domain; DNA... 0.02 OrthoFinder
EOD36720 No alias DNA mismatch repair protein MutS, connector domain; DNA... 0.01 OrthoFinder
PTI_01G03680.1 No alias DNA mismatch repair protein MutS, core; DNA mismatch... 0.01 OrthoFinder
XM_003057570.1 MicpuC2_56979, 56979 DNA mismatch repair protein MSH3 (MSH3) 0.01 OrthoFinder
XM_003063722.1 MicpuC2_48920, 48920 UbiE/COQ5 methyltransferase; Protein of unknown function... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR007695 DNA_mismatch_repair_MutS-lik_N 226 311
No external refs found!