1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold5198.1

SymbC1.scaffold5198.1 (5198.1)


Aliases : 5198.1

Description : EF-hand domain [Interproscan].


Gene families : OG_01_0007271 (OrthoFinder) Phylogenetic Tree(s): OG0007271_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5198.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold274.5 274.5 EF-hand domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004451 isocitrate lyase activity IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 335 402
IPR002048 EF_hand_dom 239 259
No external refs found!