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  5. Cpa|evm.model.tig00020610.15

Cpa|evm.model.tig00020610.15 (tig00020610_g11953.t1)


Aliases : tig00020610_g11953.t1

Description : Vacuolar-sorting protein BRO1 OS=Arabidopsis thaliana


Gene families : OG_01_0002372 (OrthoFinder) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020610.15
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre01.g004350 30788641 Vesicle trafficking.endomembrane trafficking.protein... 0.03 OrthoFinder
Cz11g05140.t1 No alias ALIX V-shaped domain; BRO1 domain [Interproscan]. 0.02 OrthoFinder
EOD33800 No alias BRO1 domain [Interproscan]. 0.02 OrthoFinder
Vocar.0013s0045.1 32896207 ALIX V-shaped domain; BRO1 domain [Interproscan]. 0.03 OrthoFinder
XM_003055463.1 MicpuC2_24224, 24224 BRO1 domain; ALIX V-shaped domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR025304 ALIX_V_dom 383 660
IPR004328 BRO1_dom 127 333
No external refs found!