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  5. SymbC1.scaffold5079.2

SymbC1.scaffold5079.2 (5079.2)


Aliases : 5079.2

Description : Chlorophyll A-B binding protein [Interproscan].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5079.2
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
PTI_07G04400.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_15G00600.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
Sro74_g040880.1 Contig4700.g34950 I chlorophyll a/b-binding protein 0.02 OrthoFinder
TP01G11130.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
XM_002506509.1 MICPUN_105009, 105009 Chlorophyll a/b-binding protein (LI818R) 0.01 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492420.1_9113 KAA8492420 Chlorophyll a-b binding protein 1B-21, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 332 473
IPR022796 Chloroa_b-bind 534 625
IPR022796 Chloroa_b-bind 108 274
No external refs found!