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  5. SymbC1.scaffold5006.2

SymbC1.scaffold5006.2 (5006.2)


Aliases : 5006.2

Description : Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha family [Interproscan].


Gene families : OG_01_0002411 (OrthoFinder) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold5006.2
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
XM_003060576.1 MicpuC2_34543, 34543 Type II secretory pathway family protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002208 SecY/SEC61-alpha 638 982
IPR019561 Translocon_Sec61/SecY_plug_dom 607 637
No external refs found!