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  5. SymbC1.scaffold4675.1

SymbC1.scaffold4675.1 (4675.1)


Aliases : 4675.1

Description : SNF2-related, N-terminal domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4675.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Dusal.0024s00040.1 33202173 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
Dusal.0280s00012.1 33203409 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
EOD05386 No alias Chromo domain; Helicase, C-terminal; SNF2-related,... 0.01 OrthoFinder
EOD29581 No alias ISWI, HAND domain [Interproscan]. 0.02 OrthoFinder
OT_05G01620.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain... 0.02 OrthoFinder
OT_12G02840.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
TP06G01980.1 No alias SNF2-related, N-terminal domain; Helicase, C-terminal... 0.03 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05550.1_27 HaLaN_00030, GFH05550 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000629.1_cds_GFH13581.1_8058 HaLaN_09499, GFH13581 SNF2-related, N-terminal domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000629.1_cds_GFH13582.1_8059 HaLaN_09500, GFH13582 Helicase, C-terminal [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18335.1_5824 PRW18335 TATA-binding-associated factor 172 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 271 384
IPR000330 SNF2_N 9 192
No external refs found!