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  5. SymbC1.scaffold4638.1

SymbC1.scaffold4638.1 (4638.1)


Aliases : 4638.1

Description : RNA-binding domain, S1, IF1 type [Interproscan].


Gene families : OG_01_0005267 (OrthoFinder) Phylogenetic Tree(s): OG0005267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4638.1
Cluster HCCA: Cluster_38


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006196 RNA-binding_domain_S1_IF1 82 140
No external refs found!