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  5. SymbC1.scaffold4613.1

SymbC1.scaffold4613.1 (4613.1)


Aliases : 4613.1

Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].


Gene families : OG_01_0001414 (OrthoFinder) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4613.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold185.5 185.5 Reverse transcriptase, RNA-dependent DNA polymerase... 0.02 OrthoFinder
SymbC1.scaffold2715.7 2715.7 Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
SymbC1.scaffold534.4 534.4 Reverse transcriptase, RNA-dependent DNA polymerase... 0.02 OrthoFinder
SymbC1.scaffold6715.1 6715.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold7480.1 7480.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold8361.3 8361.3 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0004057 arginyltransferase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0016598 protein arginylation IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR013103 RVT_2 1517 1761
No external refs found!