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  5. SymbC1.scaffold4572.1

SymbC1.scaffold4572.1 (4572.1)


Aliases : 4572.1

Description : Hypothetical protein


Gene families : OG_01_0000185 (OrthoFinder) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4572.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1782.1 1782.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold1818.3 1818.3 C-5 cytosine methyltransferase [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2591.1 2591.1 Hypothetical protein 0.01 OrthoFinder
SymbC1.scaffold585.3 585.3 C-5 cytosine methyltransferase [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!