SymbC1.scaffold4541.2 (4541.2)

Aliases : 4541.2

Description : EF-hand domain; Ion transport domain [Interproscan].

Gene families : OG_01_0000149 (OrthoFinder) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4541.2
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold235.7	235.7	Ion transport domain [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold3009.1	3009.1	Ion transport domain [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold3317.3	3317.3	Ion transport domain; Translation Initiation factor eIF-...	0.02	OrthoFinder
SymbC1.scaffold4701.2	4701.2	Ion transport domain [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold66.25	66.25	Ion transport domain [Interproscan].	0.03	OrthoFinder
SymbC1.scaffold7358.2	7358.2	EF-hand domain pair; Ion transport domain [Interproscan].	0.02	OrthoFinder
SymbC1.scaffold7358.3	7358.3	EF-hand domain; Ion transport domain [Interproscan].	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Enrichment
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Enrichment
BP	GO:0007154	cell communication	IEP	Enrichment
BP	GO:0009117	nucleotide metabolic process	IEP	Enrichment
BP	GO:0009165	nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Enrichment
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Enrichment
MF	GO:0019238	cyclohydrolase activity	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	235	494
IPR002048	EF_hand_dom	519	587

External Links

No external refs found!