SymbC1.scaffold4506.1 (4506.1)

Aliases : 4506.1

Description : DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase, AAA domain [Interproscan].

Gene families : OG_01_0000282 (OrthoFinder) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4506.1
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
OT_09G02770.1	No alias	DNA2/NAM7 helicase, AAA domain; RNA helicase UPF1,...	0.02	OrthoFinder
Sro985_g227980.1	Contig762.g8650	Polymerase alpha-associated DNA helicase A	0.01	OrthoFinder
Transcript_contig_567	567	DNA2/NAM7 helicase-like, AAA domain; DNA2/NAM7 helicase,...	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Enrichment
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Enrichment
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Enrichment
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Enrichment
BP	GO:0010109	regulation of photosynthesis	IEP	Enrichment
BP	GO:0010207	photosystem II assembly	IEP	Enrichment
MF	GO:0010242	oxygen evolving activity	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Enrichment
BP	GO:0042549	photosystem II stabilization	IEP	Enrichment
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
CC	GO:1990204	oxidoreductase complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	82	161
IPR041677	DNA2/NAM7_AAA_11	175	244
IPR041679	DNA2/NAM7-like_C	253	445

External Links

No external refs found!