1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold450.20

SymbC1.scaffold450.20 (450.20)


Aliases : 450.20

Description : DDE superfamily endonuclease domain [Interproscan].


Gene families : OG_01_0005067 (OrthoFinder) Phylogenetic Tree(s): OG0005067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold450.20
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2728.1 2728.1 DDE superfamily endonuclease domain [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold3867.3 3867.3 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004875 DDE_SF_endonuclease_dom 304 433
No external refs found!