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  5. SymbC1.scaffold4420.2

SymbC1.scaffold4420.2 (4420.2)


Aliases : 4420.2

Description : Dynein heavy chain region D6 P-loop domain; Dynein heavy chain, coiled coil stalk; Dynein heavy chain, ATP-binding dynein motor region; Dynein heavy chain, C-terminal domain; Dynein heavy chain 3, AAA+ lid domain; Dynein heavy chain AAA lid domain; Dynein heavy chain, AAA module D4 [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4420.2
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.64 tig00000194_g14791.t1 Dynein-1-alpha heavy chain, flagellar inner arm I1... 0.01 OrthoFinder
Cpa|evm.model.tig00000404.39 tig00000404_g400.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cpa|evm.model.tig00000404.40 tig00000404_g400.t1 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cpa|evm.model.tig00000828.5 tig00000828_g4605.t1 Dynein alpha chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder
Cpa|evm.model.tig00021017.28 tig00021017_g17202.t1 Dynein gamma chain, flagellar outer arm OS=Chlamydomonas... 0.02 OrthoFinder
Cre02.g141606 30785635, DHC9 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre05.g244250 30783474, DHC6 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre06.g265950 30780047, DHC3 Cytoskeleton.microtubular network.Dynein... 0.01 OrthoFinder
Cre09.g392282 30780366, DHC2 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre12.g484250 30793433, DHC1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre14.g624950 30776158, DHC10 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre14.g627576 30776135 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cre16.g685450 30777555, DHC8 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Dusal.0002s00068.1 33187943 Hypothetical protein 0.01 OrthoFinder
Dusal.0184s00016.1 33197100 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0184s00017.1 33197111 Dynein heavy chain, domain-2; Dynein heavy chain,... 0.01 OrthoFinder
Dusal.0252s00012.1 33187305 Dynein heavy chain, domain-2 [Interproscan]. 0.01 OrthoFinder
Dusal.0298s00005.1 33203586 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.02 OrthoFinder
Dusal.0325s00011.1 33191950 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0395s00012.1 33190056 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0531s00001.1 33194997 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0627s00001.1 33192876 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0686s00003.1 33191472 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.02 OrthoFinder
EOD13626 No alias Dynein heavy chain AAA lid domain; Dynein heavy chain,... 0.01 OrthoFinder
OT_06G04500.1 No alias Dynein heavy chain, domain-1; Dynein heavy chain region... 0.02 OrthoFinder
OT_14G00090.1 No alias Dynein heavy chain, domain-1; Dynein heavy chain region... 0.03 OrthoFinder
SymbC1.scaffold1440.1 1440.1 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.03 OrthoFinder
SymbC1.scaffold3195.2 3195.2 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.03 OrthoFinder
SymbC1.scaffold479.3 479.3 Dynein heavy chain region D6 P-loop domain;... 0.03 OrthoFinder
Vocar.0001s1061.1 32885451 Dynein heavy chain, coiled coil stalk; Dynein heavy... 0.02 OrthoFinder
Vocar.0027s0019.1 32887262 Dynein heavy chain, coiled coil stalk; Dynein heavy... 0.01 OrthoFinder
XM_002505534.1 MICPUN_104997, 104997 Dynein-1-beta heavy chain, flagellar inner arm I1 complex (DHC10) 0.02 OrthoFinder
XM_002505558.1 MICPUN_104998, 104998 Dynein heavy chain (DHC4) 0.02 OrthoFinder
lcl|BLLF01000314.1_cds_GFH10421.1_4898 HaLaN_05731, GFH10421 Dynein heavy chain, ATP-binding dynein motor region;... 0.01 OrthoFinder
lcl|BLLF01001164.1_cds_GFH17539.1_12016 HaLaN_14199, GFH17539 Dynein heavy chain, AAA module D4; Dynein heavy chain... 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59277.1_6968 PRW59277 Dynein heavy chain 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR041228 Dynein_C 1614 1863
IPR041658 AAA_lid_11 1442 1605
IPR035706 AAA_9 841 1061
IPR041589 DNAH3_AAA_lid_1 64 148
IPR024317 Dynein_heavy_chain_D4_dom 198 462
IPR024743 Dynein_HC_stalk 475 812
IPR004273 Dynein_heavy_D6_P-loop 1316 1440
No external refs found!