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Aliases : 4416.1
Description : Thrombospondin type-1 (TSP1) repeat [Interproscan].
Gene families : OG_01_0002877 (OrthoFinder) Phylogenetic Tree(s): OG0002877_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold4416.1 | |
| Cluster | HCCA: Cluster_116 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000012 | single strand break repair | IEP | Enrichment |
| BP | GO:0000154 | rRNA modification | IEP | Enrichment |
| BP | GO:0001510 | RNA methylation | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003777 | microtubule motor activity | IEP | Enrichment |
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004556 | alpha-amylase activity | IEP | Enrichment |
| MF | GO:0004620 | phospholipase activity | IEP | Enrichment |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | Enrichment |
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0005875 | microtubule associated complex | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Enrichment |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | Enrichment |
| BP | GO:0006928 | movement of cell or subcellular component | IEP | Enrichment |
| BP | GO:0007017 | microtubule-based process | IEP | Enrichment |
| BP | GO:0007018 | microtubule-based movement | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0016160 | amylase activity | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
| CC | GO:0016459 | myosin complex | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| BP | GO:0016559 | peroxisome fission | IEP | Enrichment |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0030247 | polysaccharide binding | IEP | Enrichment |
| CC | GO:0030286 | dynein complex | IEP | Enrichment |
| BP | GO:0031167 | rRNA methylation | IEP | Enrichment |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Enrichment |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Enrichment |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Enrichment |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0048285 | organelle fission | IEP | Enrichment |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | Enrichment |
| BP | GO:0070475 | rRNA base methylation | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| MF | GO:2001070 | starch binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000884 | TSP1_rpt | 657 | 705 |
| IPR000884 | TSP1_rpt | 256 | 300 |
| IPR000884 | TSP1_rpt | 71 | 119 |
| IPR000884 | TSP1_rpt | 539 | 588 |
| IPR000884 | TSP1_rpt | 369 | 413 |
| IPR000884 | TSP1_rpt | 2 | 38 |
| IPR000884 | TSP1_rpt | 596 | 645 |
| IPR000884 | TSP1_rpt | 715 | 759 |
| IPR000884 | TSP1_rpt | 431 | 473 |
| IPR000884 | TSP1_rpt | 482 | 531 |
| IPR000884 | TSP1_rpt | 895 | 918 |
| IPR000884 | TSP1_rpt | 310 | 360 |
| IPR000884 | TSP1_rpt | 130 | 163 |
| IPR000884 | TSP1_rpt | 777 | 826 |
| No external refs found! |