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  5. SymbC1.scaffold4407.7

SymbC1.scaffold4407.7 (4407.7)


Aliases : 4407.7

Description : SNF2-related, N-terminal domain [Interproscan].


Gene families : OG_01_0000210 (OrthoFinder) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold4407.7
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021014.10 tig00021014_g17092.t1 DNA repair protein RAD5A OS=Arabidopsis thaliana 0.01 OrthoFinder
EOD35283 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.02 OrthoFinder
OT_13G02770.1 No alias Helicase, C-terminal; SNF2-related, N-terminal domain;... 0.01 OrthoFinder
PTI_08G01990.1 No alias Zinc finger, C3HC4 type (RING finger); Helicase,... 0.01 OrthoFinder
Sro298_g110990.1 Contig4399.g33030 Regulator of chromatin subfamily A member 3-like 1 0.01 OrthoFinder
Sro535_g161980.1 Contig1610.g14589 Regulator of chromatin subfamily A member 3-like 1 0.02 OrthoFinder
Transcript_contig_59173 59173 SNF2-related, N-terminal domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 16 131
No external refs found!