SymbC1.scaffold44.4 (44.4)

Aliases : 44.4

Description : Condensation domain; AMP-dependent synthetase/ligase; Thioesterase; Phosphopantetheine binding ACP domain [Interproscan].

Gene families : OG_01_0000387 (OrthoFinder) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold44.4
Cluster	HCCA: Cluster_90

Target	Alias	Description	ECC score	Gene Family Method	Actions
TP04G09120.1	No alias	Male sterility, NAD-binding; Phosphopantetheine binding...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001031	Thioesterase	1685	1915
IPR000873	AMP-dep_Synth/Lig	1052	1477
IPR000873	AMP-dep_Synth/Lig	57	318
IPR009081	PP-bd_ACP	505	566
IPR009081	PP-bd_ACP	429	489
IPR001242	Condensatn	594	1006

External Links

No external refs found!