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  5. SymbC1.scaffold439.1

SymbC1.scaffold439.1 (439.1)


Aliases : 439.1

Description : Proteasome/cyclosome repeat; Endonuclease/exonuclease/phosphatase; 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal; RPN1/RPN2, N-terminal [Interproscan].


Gene families : OG_01_0002845 (OrthoFinder) Phylogenetic Tree(s): OG0002845_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold439.1
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
EOD21217 No alias 26S proteasome non-ATPase regulatory subunit RPN1,... 0.02 OrthoFinder
Vocar.0074s0017.1 32899259 Proteasome/cyclosome repeat; 26S proteasome non-ATPase... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
InterPro domains Description Start Stop
IPR041433 RPN1_C 1141 1174
IPR002015 Proteasome/cyclosome_rpt 990 1017
IPR005135 Endo/exonuclease/phosphatase 24 356
IPR040892 RPN1_N 386 643
No external refs found!