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  5. SymbC1.scaffold4357.3

SymbC1.scaffold4357.3 (4357.3)


Aliases : 4357.3

Description : EF-hand domain; SPX domain; EXS, C-terminal [Interproscan].


Gene families : OG_01_0001888 (OrthoFinder) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4357.3
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
EOD18097 No alias SSRP1 domain; Domain of unknown function DUF1747; FACT... 0.01 OrthoFinder
TP05G05870.1 No alias FACT complex subunit POB3-like, N-terminal PH domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 790 813
IPR002048 EF_hand_dom 1205 1223
IPR004342 EXS_C 294 407
IPR004331 SPX_dom 1 34
No external refs found!