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  5. SymbC1.scaffold4294.6

SymbC1.scaffold4294.6 (4294.6)


Aliases : 4294.6

Description : NHL repeat [Interproscan].


Gene families : OG_01_0000024 (OrthoFinder) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4294.6
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.118 tig00000076_g2415.t1 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.01 OrthoFinder
EOD06844 No alias NHL repeat [Interproscan]. 0.02 OrthoFinder
EOD06845 No alias Hypothetical protein [Ensembl]. 0.05 OrthoFinder
EOD14223 No alias Lactonase, 7-bladed beta propeller; BTB/POZ domain... 0.02 OrthoFinder
EOD39638 No alias Lactonase, 7-bladed beta propeller; BTB/POZ domain... 0.02 OrthoFinder
EOD41568 No alias BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
OT_01G03220.1 No alias IPT domain [Interproscan]. 0.02 OrthoFinder
XM_003056336.1 MicpuC2_55334, 55334 NHL repeat [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32604.1_3915 PRW32604 NHL repeat-containing 2 isoform B 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0016805 dipeptidase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001258 NHL_repeat 201 228
IPR001258 NHL_repeat 94 120
No external refs found!