SymbC1.scaffold4254.3 (4254.3)

Aliases : 4254.3

Description : Oxidoreductase FAD/NAD(P)-binding; Citrate transporter-like domain; Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain; Forkhead-associated (FHA) domain; Cytochrome b5-like heme/steroid binding domain; Moybdenum cofactor oxidoreductase, dimerisation [Interproscan].

Gene families : OG_01_0000249 (OrthoFinder) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SymbC1.scaffold4254.3
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
PTI_20G01660.1 No alias Flavoprotein pyridine nucleotide cytochrome... 0.02 OrthoFinder
Sro1064_g237250.1 Contig2708.g21805 Nitrate reductase [NAD(P)H] 0.02 OrthoFinder
Sro665_g183780.1 Contig1678.g15071 Nitrate reductase [NADH] (Fragment) 0.01 OrthoFinder
Sro665_g183780.2 No alias Flavoprotein pyridine nucleotide cytochrome... 0.01 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21069.1_4866 PRW21069 Nitrate reductase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0030151 molybdenum ion binding IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0015204 urea transmembrane transporter activity IEP Enrichment
BP GO:0015840 urea transport IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019755 one-carbon compound transport IEP Enrichment
MF GO:0042887 amide transmembrane transporter activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071918 urea transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000253 FHA_dom 1542 1589
IPR005066 MoCF_OxRdtse_dimer 710 852
IPR001433 OxRdtase_FAD/NAD-bd 1205 1325
IPR001199 Cyt_B5-like_heme/steroid-bd 934 1003
IPR004680 Cit_transptr-like_dom 72 619
IPR008333 Cbr1-like_FAD-bd_dom 1081 1185
No external refs found!