SymbC1.scaffold4254.3 (4254.3)

Aliases : 4254.3

Description : Oxidoreductase FAD/NAD(P)-binding; Citrate transporter-like domain; Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain; Forkhead-associated (FHA) domain; Cytochrome b5-like heme/steroid binding domain; Moybdenum cofactor oxidoreductase, dimerisation [Interproscan].

Gene families : OG_01_0000249 (OrthoFinder) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4254.3
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
PTI_20G01660.1	No alias	Flavoprotein pyridine nucleotide cytochrome...	0.02	OrthoFinder
Sro1064_g237250.1	Contig2708.g21805	Nitrate reductase [NAD(P)H]	0.02	OrthoFinder
Sro665_g183780.1	Contig1678.g15071	Nitrate reductase [NADH] (Fragment)	0.01	OrthoFinder
Sro665_g183780.2	No alias	Flavoprotein pyridine nucleotide cytochrome...	0.01	OrthoFinder
lcl\|LHPG02000020.1_cds_PRW21069.1_4866	PRW21069	Nitrate reductase	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0030151	molybdenum ion binding	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0015204	urea transmembrane transporter activity	IEP	Enrichment
BP	GO:0015840	urea transport	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0019755	one-carbon compound transport	IEP	Enrichment
MF	GO:0042887	amide transmembrane transporter activity	IEP	Enrichment
BP	GO:0071705	nitrogen compound transport	IEP	Enrichment
BP	GO:0071918	urea transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000253	FHA_dom	1542	1589
IPR005066	MoCF_OxRdtse_dimer	710	852
IPR001433	OxRdtase_FAD/NAD-bd	1205	1325
IPR001199	Cyt_B5-like_heme/steroid-bd	934	1003
IPR004680	Cit_transptr-like_dom	72	619
IPR008333	Cbr1-like_FAD-bd_dom	1081	1185

External Links

No external refs found!

SymbC1.scaffold4254.3 (4254.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation