SymbC1.scaffold4253.3 (4253.3)

Aliases : 4253.3

Description : Chaperonin Cpn60/TCP-1 family [Interproscan].

Gene families : OG_01_0000322 (OrthoFinder) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold4253.3
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
Cre04.g231222	30791114, CPN60A	External stimuli response.temperature.Hsp...	0.02	OrthoFinder
Cre07.g339150	30775388, CPN60B2	External stimuli response.temperature.Hsp...	0.03	OrthoFinder
EOD29151	No alias	Heat shock protein 60 [Ensembl].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Enrichment
MF	GO:0008810	cellulase activity	IEP	Enrichment
BP	GO:0015696	ammonium transport	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Enrichment
MF	GO:0030151	molybdenum ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	2	205

External Links

No external refs found!