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  5. SymbC1.scaffold4221.4

SymbC1.scaffold4221.4 (4221.4)


Aliases : 4221.4

Description : Sushi/SCR/CCP domain; CNNM, transmembrane domain [Interproscan].


Gene families : OG_01_0000296 (OrthoFinder) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4221.4
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000024.1_cds_KAA8490526.1_4676 KAA8490526 Metal transporter CNNM2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
BP GO:0016540 protein autoprocessing IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000436 Sushi_SCR_CCP_dom 33 77
IPR002550 CNNM 390 559
No external refs found!