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  5. SymbC1.scaffold4221.3

SymbC1.scaffold4221.3 (4221.3)


Aliases : 4221.3

Description : Peptide methionine sulphoxide reductase MsrA [Interproscan].


Gene families : OG_01_0000336 (OrthoFinder) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4221.3
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Sro1062_g236950.1 Contig721.g8301 Peptide methionine sulfoxide reductase MsrA 0.02 OrthoFinder
XM_003063167.1 MicpuC2_53038, 53038 Peptide-methionine--S-oxide reductase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR002569 Met_Sox_Rdtase_MsrA 334 495
No external refs found!