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  5. SymbC1.scaffold415.18

SymbC1.scaffold415.18 (415.18)


Aliases : 415.18

Description : Alpha-amylase/branching enzyme, C-terminal all beta [Interproscan].


Gene families : OG_01_0000579 (OrthoFinder) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold415.18
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cre06.g289850 30779992, SBE1 Carbohydrate metabolism.starch... 0.01 OrthoFinder
Cre10.g444700 30790834, SBE3 Carbohydrate metabolism.starch... 0.02 OrthoFinder
Dusal.0286s00007.1 33201799 Glycoside hydrolase, family 13, N-terminal; Glycosyl... 0.07 OrthoFinder
Dusal.0572s00007.1 33202694 Alpha-amylase/branching enzyme, C-terminal all beta... 0.02 OrthoFinder
Dusal.2421s00002.1 33189101 Hypothetical protein 0.02 OrthoFinder
Vocar.0002s0315.1 32891138 Glycosyl hydrolase, family 13, catalytic domain;... 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60631.1_4500 PRW60631 Starch branching enzyme I 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 331 418
No external refs found!