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  5. SymbC1.scaffold41.12

SymbC1.scaffold41.12 (41.12)


Aliases : 41.12

Description : FKBP-type peptidyl-prolyl cis-trans isomerase domain [Interproscan].


Gene families : OG_01_0000047 (OrthoFinder) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold41.12
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cz14g18200.t1 No alias FKBP-type peptidyl-prolyl cis-trans isomerase domain... 0.01 OrthoFinder
Vocar.0001s0032.1 32884274 FKBP-type peptidyl-prolyl cis-trans isomerase domain... 0.02 OrthoFinder
lcl|BLLF01001182.1_cds_GFH17651.1_12128 HaLaN_14330, GFH17651 Peptidylprolyl isomerase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006897 endocytosis IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 50 137
No external refs found!