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  5. SymbC1.scaffold4085.1

SymbC1.scaffold4085.1 (4085.1)


Aliases : 4085.1

Description : Kelch repeat type 1 [Interproscan].


Gene families : OG_01_0002207 (OrthoFinder) Phylogenetic Tree(s): OG0002207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4085.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre03.g192350 30787022 No description available 0.01 OrthoFinder
Sro1440_g272820.1 Contig840.g9260 Kelch-like 0.01 OrthoFinder
SymbC1.scaffold2471.3 2471.3 Kelch repeat type 1 [Interproscan]. 0.02 OrthoFinder
TP06G00060.1 No alias Galactose oxidase, central domain; Kelch repeat type 1... 0.02 OrthoFinder
Vocar.0035s0129.1 32896815 Kelch repeat type 1 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
InterPro domains Description Start Stop
IPR006652 Kelch_1 234 273
IPR006652 Kelch_1 162 199
IPR006652 Kelch_1 127 160
No external refs found!