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  5. SymbC1.scaffold4020.3

SymbC1.scaffold4020.3 (4020.3)


Aliases : 4020.3

Description : Alpha-ketoglutarate-dependent dioxygenase AlkB-like [Interproscan].


Gene families : OG_01_0008819 (OrthoFinder) Phylogenetic Tree(s): OG0008819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold4020.3
Cluster HCCA: Cluster_139


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR027450 AlkB-like 278 459
No external refs found!